University of Cape Town
UCT High Performance Computing Cluster


Last 72 hours completed jobs for sadacc-long queue

1533 Jobs: Total CPU time: 4341 hours (180 days)       Total Wall time: 1109 hours (46 days)

2024-10-20
Completion time User Job ID and name Account CPU time Wall time MaxRSS MaxVMem Tasks Cores Nodes AveRead AveWrite Exit code: status
2024-10-20 00:53:49 eshkev001 2374815 nf-haplotypeCaller_(processing_SCD429_S22_L003.dupsMarked.bqsr) humgen 6-18:34:12 1-03:05:42 43.47 GB 59.91 GB 1 6 1 54728.21M 10768.30M COMPLETED
2024-10-20 00:54:24 eshkev001 2374799 nf-haplotypeCaller_(processing_KD159_dupsMarked.merged.bqsr) humgen 7-00:28:18 1-04:04:43 43.43 GB 59.95 GB 1 6 1 53035.75M 10493.34M COMPLETED
2024-10-20 01:04:43 eshkev001 2374798 nf-haplotypeCaller_(processing_SCD425_S18_L002.dupsMarked.bqsr) humgen 7-02:20:12 1-04:23:22 43.44 GB 60.03 GB 1 6 1 57092.36M 10152.32M COMPLETED
2024-10-20 01:06:15 eshkev001 2374803 nf-haplotypeCaller_(processing_SCD343_S16_L002.dupsMarked.bqsr) humgen 6-22:53:30 1-03:48:55 43.55 GB 59.84 GB 1 6 1 51083.00M 9873.39M COMPLETED
2024-10-20 01:07:09 eshkev001 2374797 nf-haplotypeCaller_(processing_CSS31_dupsMarked.merged.bqsr) humgen 7-03:03:54 1-04:30:39 43.69 GB 59.9 GB 1 6 1 59021.14M 9768.82M COMPLETED
2024-10-20 01:11:59 eshkev001 2374810 nf-haplotypeCaller_(processing_KD110_dupsMarked.merged.bqsr) humgen 6-21:47:12 1-03:37:52 43.64 GB 59.92 GB 1 6 1 51396.83M 9239.15M COMPLETED
2024-10-20 01:28:50 eshkev001 2374794 nf-haplotypeCaller_(processing_KD154_dupsMarked.merged.bqsr) humgen 7-06:07:42 1-05:01:17 43.4 GB 59.87 GB 1 6 1 52150.23M 9664.87M COMPLETED
2024-10-20 01:48:38 eshkev001 2374828 nf-haplotypeCaller_(processing_KD190_dupsMarked.merged.bqsr) humgen 6-11:22:24 1-01:53:44 43.56 GB 60 GB 1 6 1 50332.36M 10442.50M COMPLETED
2024-10-20 01:49:07 eshkev001 2374818 nf-haplotypeCaller_(processing_SCD144_S11_L002.dupsMarked.bqsr) humgen 6-21:48:00 1-03:38:00 43.53 GB 59.99 GB 1 6 1 55273.25M 9994.40M COMPLETED
2024-10-20 01:50:29 eshkev001 2374817 nf-haplotypeCaller_(processing_KD62_S77_L002.dupsMarked.bqsr) humgen 6-21:59:42 1-03:39:57 43.48 GB 59.9 GB 1 6 1 52635.13M 9310.69M COMPLETED
2024-10-20 01:59:31 eshkev001 2374801 nf-haplotypeCaller_(processing_CSS76_S17_L002.dupsMarked.bqsr) humgen 7-06:16:48 1-05:02:48 43.64 GB 59.88 GB 1 6 1 54989.76M 9362.13M COMPLETED
2024-10-20 02:11:16 eshkev001 2374822 nf-haplotypeCaller_(processing_KD273_dupsMarked.merged.bqsr) humgen 6-20:48:18 1-03:28:03 43.55 GB 59.84 GB 1 6 1 924.62M 21.32M COMPLETED
2024-10-20 02:13:33 eshkev001 2374819 nf-haplotypeCaller_(processing_CSS99_dupsMarked.merged.bqsr) humgen 6-23:09:00 1-03:51:30 43.61 GB 59.89 GB 1 6 1 54267.16M 9489.99M COMPLETED
2024-10-20 02:26:24 eshkev001 2374802 nf-haplotypeCaller_(processing_SCD415_dupsMarked.merged.bqsr) humgen 7-06:58:36 1-05:09:46 43.65 GB 59.93 GB 1 6 1 56413.18M 10378.30M COMPLETED
2024-10-20 02:37:18 eshkev001 2374816 nf-haplotypeCaller_(processing_KD276_dupsMarked.merged.bqsr) humgen 7-03:15:00 1-04:32:30 43.52 GB 60.02 GB 1 6 1 54859.95M 10721.81M COMPLETED
2024-10-20 02:49:45 eshkev001 2374821 nf-haplotypeCaller_(processing_SCD648_S28_L003.dupsMarked.bqsr) humgen 7-02:16:18 1-04:22:43 43.48 GB 59.79 GB 1 6 1 55837.09M 12028.38M COMPLETED
2024-10-20 03:51:10 eshkev001 2374824 nf-haplotypeCaller_(processing_SCD270_S13_L002.dupsMarked.bqsr) humgen 7-01:46:30 1-04:17:45 43.43 GB 59.89 GB 1 6 1 52503.55M 9877.29M COMPLETED
2024-10-20 03:51:32 eshkev001 2374911 wgs-postprocess humgen 1-21:57:20 05:44:40 5.19 GB 58.92 GB 1 8 1 75279.29M 1.94M FAILED
2024-10-20 04:07:10 eshkev001 2374814 nf-haplotypeCaller_(processing_SS4_S20_L002.dupsMarked.bqsr) humgen 7-15:00:18 1-06:30:03 43.62 GB 59.92 GB 1 6 1 1023.56M 23.59M COMPLETED
2024-10-20 04:09:32 eshkev001 2374826 nf-haplotypeCaller_(processing_KD52_dupsMarked.merged.bqsr) humgen 7-02:54:24 1-04:29:04 43.46 GB 59.88 GB 1 6 1 957.72M 22.07M COMPLETED
2024-10-20 04:21:01 eshkev001 2374791 nf-haplotypeCaller_(processing_CSS63_dupsMarked.merged.bqsr) humgen 8-02:06:18 1-08:21:03 43.64 GB 59.89 GB 1 6 1 1083.65M 25.00M COMPLETED
2024-10-20 05:12:46 eshkev001 2374844 nf-haplotypeCaller_(processing_KD192_S36_L004.dupsMarked.bqsr) humgen 6-18:20:54 1-03:03:29 43.47 GB 59.9 GB 1 6 1 53926.99M 10787.14M COMPLETED
2024-10-20 05:51:16 eshkev001 2374850 nf-haplotypeCaller_(processing_SCD301_S15_L002.dupsMarked.bqsr) humgen 6-19:16:18 1-03:12:43 43.68 GB 59.75 GB 1 6 1 53680.49M 9.50G COMPLETED
2024-10-20 05:53:49 eshkev001 2374988 wgs-postprocess humgen 00:00:32 00:00:04 0 GB 0 GB 1 1 8 FAILED
2024-10-20 07:15:29 eshkev001 2374853 nf-haplotypeCaller_(processing_CSS77_S18_L002.dupsMarked.bqsr) humgen 6-09:47:36 1-01:37:56 43.47 GB 59.96 GB 1 6 1 49945.50M 9374.86M COMPLETED
2024-10-20 09:46:55 eshkev001 2374870 nf-haplotypeCaller_(processing_SCD583_S26_L003.dupsMarked.bqsr) humgen 6-09:25:42 1-01:34:17 43.54 GB 0 GB 1 6 1 50960.99M 11288.93M COMPLETED
2024-10-20 10:39:52 eshkev001 2374800 nf-haplotypeCaller_(processing_SCD662_S29_L003.dupsMarked.bqsr) humgen 9-10:32:36 1-13:45:26 43.7 GB 59.92 GB 1 6 1 85470.46M 6878.08M COMPLETED
2024-10-20 11:48:59 eshkev001 2374989 wgs-postprocess humgen 1-13:28:00 04:41:00 6.41 GB 58.93 GB 1 8 1 21789.22M 42901.37M COMPLETED
2024-10-20 12:50:46 eshkev001 2374890 nf-haplotypeCaller_(processing_KD157_dupsMarked.merged.bqsr) humgen 5-04:58:48 20:49:48 43.79 GB 59.85 GB 1 6 1 53936.13M 10718.60M COMPLETED
2024-10-20 15:13:19 eshkev001 2374894 nf-haplotypeCaller_(processing_CSS45_dupsMarked.merged.bqsr) humgen 5-06:28:12 21:04:42 43.61 GB 59.81 GB 1 6 1 54967.07M 10448.92M COMPLETED
2024-10-20 15:14:25 eshkev001 2374893 nf-haplotypeCaller_(processing_KD94_dupsMarked.merged.bqsr) humgen 5-07:27:54 21:14:39 43.67 GB 59.96 GB 1 6 1 50248.09M 9657.05M COMPLETED
2024-10-20 15:38:12 eshkev001 2374888 nf-haplotypeCaller_(processing_CSS58_dupsMarked.merged.bqsr) humgen 6-05:22:42 1-00:53:47 43.52 GB 59.86 GB 1 6 1 50337.48M 9352.48M COMPLETED
2024-10-20 17:40:51 eshkev001 2375019 wgs-postprocess humgen 00:12:40 00:01:35 0.02 GB 0.55 GB 1 8 1 41601.57M 1.02M COMPLETED
2024-10-20 17:56:00 eshkev001 2374903 nf-haplotypeCaller_(processing_CSS35_S12_L002.dupsMarked.bqsr) humgen 5-10:23:30 21:43:55 43.76 GB 59.88 GB 1 6 1 54270.99M 9780.52M COMPLETED
2024-10-20 19:09:46 eshkev001 2374891 nf-haplotypeCaller_(processing_CSS72_dupsMarked.merged.bqsr) humgen 6-17:46:18 1-02:57:43 43.68 GB 59.84 GB 1 6 1 55431.52M 9110.80M COMPLETED
2024-10-20 19:43:12 eshkev001 2374909 nf-haplotypeCaller_(processing_SCD668_dupsMarked.merged.bqsr) humgen 5-12:08:54 22:01:29 43.9 GB 59.83 GB 1 6 1 45423.76M 10117.66M COMPLETED
2024-10-20 22:06:34 eshkev001 2374978 nf-haplotypeCaller_(processing_KD193_dupsMarked.merged.bqsr) humgen 5-22:36:00 23:46:00 43.56 GB 59.9 GB 1 6 1 52752.05M 9815.61M COMPLETED
2024-10-20 22:48:32 eshkev001 2374916 nf-haplotypeCaller_(processing_CSS33_dupsMarked.merged.bqsr) humgen 6-03:23:24 1-00:33:54 43.6 GB 60.02 GB 1 6 1 60553.67M 10359.26M COMPLETED
2024-10-20 23:56:14 eshkev001 2374912 nf-haplotypeCaller_(processing_KD404_dupsMarked.merged.bqsr) humgen 6-10:44:00 1-01:47:20 43.49 GB 59.79 GB 1 6 1 55704.18M 9997.71M COMPLETED
2024-10-20 23:56:24 eshkev001 2373300 wgs-svarcall humgen 3-06:45:21 3-06:45:21 1.79 GB 42.12 GB 1 1 1 250.63M 9.83M COMPLETED
2024-10-21
Completion time User Job ID and name Account CPU time Wall time MaxRSS MaxVMem Tasks Cores Nodes AveRead AveWrite Exit code: status
2024-10-21 00:19:56 eshkev001 2375064 wgs-svarcall humgen 00:00:26 00:00:26 0 GB 0 GB 1 1 1 COMPLETED
2024-10-21 00:21:23 eshkev001 2375065 wgs-svarcall humgen 00:00:19 00:00:19 0 GB 0 GB 1 1 1 COMPLETED
2024-10-21 00:25:22 eshkev001 2375066 wgs-svarcall humgen 00:00:40 00:00:40 0.37 GB 38.75 GB 1 1 1 18.47M 0.01M COMPLETED
2024-10-21 01:11:48 eshkev001 2375017 bash humgen 14-15:29:12 07:59:18 1.44 GB 80.27 GB 44 44 1 44884.39M 24178.86M COMPLETED
2024-10-21 01:27:54 eshkev001 2375069 align humgen 00:14:40 00:00:05 0 GB 0 GB 4 1 176 COMPLETED
2024-10-21 01:29:32 eshkev001 2375070 align humgen 00:05:52 00:00:02 0 GB 0 GB 4 1 176 COMPLETED
2024-10-21 01:30:37 eshkev001 2375071 align humgen 00:20:32 00:00:07 0 GB 0 GB 4 1 176 COMPLETED
2024-10-21 01:32:55 eshkev001 2375072 align humgen 00:14:40 00:00:05 0 GB 0 GB 4 1 176 COMPLETED
2024-10-21 01:34:52 eshkev001 2375073 align humgen 00:20:32 00:00:07 0 GB 0 GB 4 1 176 COMPLETED
2024-10-21 01:38:06 eshkev001 2375074 align humgen 00:23:28 00:00:08 0 GB 0 GB 4 1 176 COMPLETED
2024-10-21 01:40:37 eshkev001 2375075 align humgen 00:05:52 00:00:02 0 GB 0 GB 4 1 176 COMPLETED
2024-10-21 01:45:41 eshkev001 2375076 align humgen 00:14:40 00:00:05 0 GB 0 GB 4 1 176 COMPLETED
2024-10-21 09:08:11 eshkev001 2375077 align humgen 53-23:21:36 07:21:36 37.28 GB 45.94 GB 1 176 4 144148.86M 124778.59M CANCELLED by 2058
2024-10-21 15:20:02 eshkev001 2375112 align humgen 44-03:16:32 06:01:07 37.22 GB 45.78 GB 1 176 4 580001.64M 564430.06M COMPLETED
2024-10-21 17:36:50 eshkev001 2375638 align humgen 00:17:36 00:00:06 0 GB 0 GB 4 1 176 COMPLETED
2024-10-21 17:38:02 eshkev001 2375639 align humgen 00:02:56 00:00:01 0 GB 0 GB 4 1 176 COMPLETED
2024-10-21 17:39:04 eshkev001 2375640 align humgen 00:05:52 00:00:02 0 GB 0 GB 4 1 176 COMPLETED
2024-10-21 17:40:57 eshkev001 2375641 align humgen 00:02:56 00:00:01 0 GB 0 GB 4 1 176 COMPLETED
2024-10-21 17:44:17 eshkev001 2375650 align humgen 00:05:52 00:00:02 0 GB 0 GB 4 1 176 COMPLETED
2024-10-21 17:45:19 eshkev001 2375653 align humgen 00:05:52 00:00:02 0 GB 0 GB 4 1 176 COMPLETED
2024-10-21 17:46:01 eshkev001 2375657 align humgen 00:05:52 00:00:02 0 GB 0 GB 4 1 176 COMPLETED
2024-10-21 17:55:09 eshkev001 2375667 align humgen 01:54:24 00:00:39 18.1 GB 24 GB 1 176 4 16473.09M 0.02M CANCELLED by 2058
2024-10-22
Completion time User Job ID and name Account CPU time Wall time MaxRSS MaxVMem Tasks Cores Nodes AveRead AveWrite Exit code: status
2024-10-22 00:27:49 eshkev001 2375672 align humgen 47-21:22:40 06:31:50 37.89 GB 45.66 GB 1 176 4 742760.28M 650030.32M COMPLETED
2024-10-22 00:42:02 eshkev001 2375068 nf-haplotypeCaller_(processing_KD49_S7_L001.dupsMarked.bqsr) humgen 5-23:48:42 23:58:07 43.68 GB 59.96 GB 1 6 1 52769.04M 10151.79M COMPLETED
2024-10-22 00:42:05 eshkev001 2375067 wgs-svarcall humgen 23:58:23 23:58:23 1.36 GB 40.37 GB 1 1 1 88.90M 1.84M COMPLETED
Completion time User Job ID and name Account CPU time Wall time MaxRSS MaxVMem Tasks Cores Nodes AveRead AveWrite Exit code: status